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  • More
    • Home
    • Services
      • Genome
      • Metagenome
      • Transcriptome
      • Epigenome
      • Genotyping
      • Bioinfomatic Analysis
      • Gut Biome
      • Baby Biome
      • Diabetic Foot Ulcer
    • Solutions
      • Saliva Collection Kit
      • Feacal Collection Kit
      • Cloud Software
      • NGS Consulting
      • Student Training
    • Resources
      • Publications
      • Downloads
      • Sample Requirements
      • FAQs
    • Company
      • About us
      • Team
    • Research
    • Contact us
  • Home
  • Services
    • Genome
    • Metagenome
    • Transcriptome
    • Epigenome
    • Genotyping
    • Bioinfomatic Analysis
    • Gut Biome
    • Baby Biome
    • Diabetic Foot Ulcer
  • Solutions
    • Saliva Collection Kit
    • Feacal Collection Kit
    • Cloud Software
    • NGS Consulting
    • Student Training
  • Resources
    • Publications
    • Downloads
    • Sample Requirements
    • FAQs
  • Company
    • About us
    • Team
  • Research
  • Contact us

Data Analysis Service

Genome data analysis

We use different customized pipelines (germline/somatic variants) based on cusotmers request.

1.   BWA-GATK4  (WGRS/WES)

2.  BWA-Strelka2  (WGRS/WES)

3.  BWA-DeepVariants  (WGRS/WES/Trio)

Genome-wide Association Analysis (GWAS)

 Applications


·  Quantitative traits of animals and plants
·  Human Phenotype Research
·  Complex disease
·  Single gene diseaseQTL


 Bioinformatics Analysis (PLINK)


·  Quality control of sequencing data

·  Map to reference genome  

·  SNP/SNV detection and annotation 

·  Phylogenetic tree construction

·  PCA analysis 

·  Linkage disequilibrium (LD) analysis 

·  Trait association analysis 

·  Functional annotation of genes in regions related to target traits 

Clinical WES

Bioinformatics Analysis / Clinical Report


·  Detected variants list with detailed information and visual charts

·  Compliance with ACMG guideline for NGS clinical use

·  Annotation using various databases ((Reference sequence DB/ Population DB/ Cancer specific 

  DB/ Constitutional variant DB/ Internal DB)) and In Silico prediction for accurate interpretation

·  Compliance 

Transcriptome data analysis





Bioinformatics Analysis and Interpretation



·  Raw data QC

·  Expressed genes and DEG's

·  GO and KEGG pathway enrichment analysis

·  Data interpretation and Manuscript support 


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